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BMC Biology

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Genome-wide analysis reveals transcriptional and translational changes during diapause of the Asian corn borer (Ostrinia furnacalis)

Published:13 September 2024 DOI: 10.1186/s12915-024-02000-1
Xingzhuo Yang, Xianguo Zhao, Zhangwu Zhao, Juan Du

Abstract

Diapause, a pivotal phase in the insect life cycle, enables survival during harsh environmental conditions. Unraveling the gene expression profiles of the diapause process helps uncover the molecular mechanisms that underlying diapause, which is crucial for understanding physiological adaptations. In this study, we utilize RNA-seq and Ribo-seq data to examine differentially expressed genes (DEGs) and translational efficiency during diapause of Asian corn borer (Ostrinia furnacalis, ACB). Our results unveil genes classified as “forwarded”, “exclusive”, “intensified”, or “buffered” during diapause, shedding light on their transcription and translation regulation patterns. Furthermore, we explore the landscape of lncRNAs (long non-coding RNAs) during diapause and identify differentially expressed lncRNAs, suggesting their roles in diapause regulation. Comparative analysis of different types of diapause in insects uncovers shared and unique KEGG pathways. While shared pathways highlight energy balance, exclusive pathways in the ACB larvae indicate insect-specific adaptations related to nutrient utilization and stress response. Interestingly, our study also reveals dynamic changes in the HSP70 gene family and proteasome pathway during diapause. Manipulating HSP protein levels and proteasome pathway by HSP activator or inhibitor and proteasome inhibitor affects diapause, indicating their vital role in the process. In summary, these findings enhance our knowledge of how insects navigate challenging conditions through intricate molecular mechanisms.

Substances (8)

Materials
Procduct Name CAS Molecular Formula Supplier Price
5'-O-[(4-Cyanophenyl)methyl]-8-[[(3,4-dichlorophenyl)methyl]amino]-adenosine 1134156-31-2 C25H23Cl2N7O4 138 suppliers $14.00-$4725.00
5'-O-[(4-Cyanophenyl)methyl]-8-[[(3,4-dichlorophenyl)methyl]amino]-adenosine 1134156-31-2 C25H23Cl2N7O4 138 suppliers $14.00-$4725.00
5'-O-[(4-Cyanophenyl)methyl]-8-[[(3,4-dichlorophenyl)methyl]amino]-adenosine 1134156-31-2 C25H23Cl2N7O4 138 suppliers $14.00-$4725.00
5'-O-[(4-Cyanophenyl)methyl]-8-[[(3,4-dichlorophenyl)methyl]amino]-adenosine 1134156-31-2 C25H23Cl2N7O4 138 suppliers $14.00-$4725.00
ML346 100872-83-1 C14H12N2O4 72 suppliers $19.00-$2804.00
ML346 100872-83-1 C14H12N2O4 72 suppliers $19.00-$2804.00
ML346 100872-83-1 C14H12N2O4 72 suppliers $19.00-$2804.00
ML346 100872-83-1 C14H12N2O4 72 suppliers $19.00-$2804.00

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